Modelado molecular de la interacción entre las proteínas virales del FPLV y proteínas de membrana de células gastrointestinales de gato doméstico (Felis catus)
| dc.contributor.advisor | Rodríguez Saza, Freddy | |
| dc.contributor.author | Pérez Patiño, Haydi Daniela | |
| dc.contributor.orcid | Rodríguez Saza, Freddy [0000-0001-9709-4258] | |
| dc.date.accessioned | 2025-09-24T20:07:19Z | |
| dc.date.available | 2025-09-24T20:07:19Z | |
| dc.date.created | 2025-08-27 | |
| dc.description | La panleucopenia felina (FPL) es una enfermedad viral causada por el virus de la panleucopenia felina (FPLV), cuya cápside está compuesta principalmente por las proteínas VP1 y VP2, implicadas en el tropismo, la antigenicidad y la interacción con el receptor de transferrina felino (TfRf). A pesar de su relevancia clínica y epidemiológica, persisten vacíos en la comprensión de los determinantes estructurales que median esta interacción. Este trabajo tuvo como objetivo analizar, mediante herramientas computacionales, la interacción VP2–TfRf para identificar contactos clave y patrones conformacionales con relevancia funcional. La investigación se desarrolló en tres fases: (1) revisión sistemática de la literatura y análisis filogenético de VP2, incorporando secuencias de FPLV y parvovirus estrechamente relacionados; (2) modelado tridimensional y validación in silico de VP1 y VP2, mediante estrategias optimizadas de alineamiento y selección de plantillas; y (3) simulación de dinámica molecular del complejo VP2–TfR1 para evaluar su estabilidad y caracterizar los contactos interresiduo. Los resultados confirman una alta homología estructural entre FPLV y el parvovirus canino (CPV), lo que permite extrapolar mecanismos de unión cápside–receptor. El modelado de VP1 y VP2 generó estructuras de alta calidad, validadas por parámetros estereoquímicos y de energía potencial. La dinámica molecular mostró que el complejo VP2–TfR1 mantiene una interfaz estable durante 100 ns, con contactos persistentes y cambios conformacionales localizados que favorecen el acoplamiento al receptor, lo que respalda la hipótesis de que la flexibilidad localizada en VP2 es clave para el reconocimiento específico del TfRf. En conjunto, este estudio aporta bases conceptuales y metodológicas para el diseño de inhibidores dirigidos a bloquear la entrada viral y para la optimización de vacunas. Asimismo, demuestra el valor de las aproximaciones in silico en virología estructural, ofreciendo herramientas para abordar vacíos de conocimiento sobre la biología del FPLV y apoyar estrategias de prevención en felinos domésticos y silvestres. | |
| dc.description.abstract | Feline panleukopenia (FPL) is a viral disease caused by the feline panleukopenia virus (FPLV), whose capsid is mainly composed of proteins VP1 and VP2, which are involved in tropism, antigenicity, and the interaction with the feline transferrin receptor (TfRf). Despite its clinical and epidemiological relevance, gaps remain in the understanding of the structural determinants that mediate this interaction. The aim of this work was to analyze, through computational tools, the VP2–TfRf interaction to identify key contacts and conformational patterns with functional relevance. The research was conducted in three phases: (1) a systematic literature review and phylogenetic analysis of VP2, incorporating sequences from FPLV and closely related parvoviruses; (2) three-dimensional modeling and in silico validation of VP1 and VP2, using optimized alignment strategies and template selection; and (3) molecular dynamics simulation of the VP2–TfR1 complex to assess its stability and characterize inter-residue contacts. The results confirm a high structural homology between FPLV and canine parvovirus (CPV), allowing extrapolation of capsid–receptor binding mechanisms. The modeling of VP1 and VP2 yielded high-quality structures, validated by stereochemical and potential energy parameters. Molecular dynamics showed that the VP2–TfR1 complex maintains a stable interface over 100 ns, with persistent contacts and localized conformational changes that favor receptor binding, supporting the hypothesis that localized flexibility in VP2 is key for specific recognition of the TfRf. Taken together, this study provides conceptual and methodological foundations for the design of inhibitors aimed at blocking viral entry and for vaccine optimization. It also demonstrates the value of in silico approaches in structural virology, offering tools to address knowledge gaps on FPLV biology and to support prevention strategies in both domestic and wild felines. | |
| dc.description.sponsorship | Arqueología y Genética SAS | |
| dc.format.mimetype | ||
| dc.identifier.uri | http://hdl.handle.net/11349/99237 | |
| dc.language.iso | spa | |
| dc.publisher | Universidad Distrital Francisco José de Caldas | |
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| dc.rights.acceso | Abierto (Texto Completo) | |
| dc.rights.accessrights | OpenAccess | |
| dc.subject | Panleucopenia felina | |
| dc.subject | FPLV | |
| dc.subject | VP1 | |
| dc.subject | VP2 | |
| dc.subject | Modelado Molecular | |
| dc.subject | Interacción proteína-proteína | |
| dc.subject.keyword | Feline panleukopenia | |
| dc.subject.keyword | FPLV | |
| dc.subject.keyword | VP1 | |
| dc.subject.keyword | VP2 | |
| dc.subject.keyword | Molecular modeling | |
| dc.subject.keyword | Protein-protein interaction | |
| dc.subject.lemb | Biología -- Tesis y disertaciones académicas | |
| dc.subject.lemb | Virus | |
| dc.subject.lemb | Gatos -- Enfermedades víricas | |
| dc.subject.lemb | Bioinformática | |
| dc.title | Modelado molecular de la interacción entre las proteínas virales del FPLV y proteínas de membrana de células gastrointestinales de gato doméstico (Felis catus) | |
| dc.title.titleenglish | Molecular modeling of the interaction between FPLV viral proteins and membrane proteins of gastrointestinal cells in domestic cat (Felis catus) | |
| dc.type | bachelorThesis | |
| dc.type.coar | http://purl.org/coar/resource_type/c_7a1f | |
| dc.type.degree | Investigación-Innovación | |
| dc.type.driver | info:eu-repo/semantics/bachelorThesis |
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